Strudel for Windows Publisher's description
Strudel is our graphical tool for visualizing genetic and physical maps of genomes for comparative purposes.
Strudel is our graphical tool for visualizing genetic and physical maps of genomes for comparative purposes. The application aims to let the user examine their data at a variety of different levels of resolution, from entire maps to individual markers, and explore syntenic relationships between genomes. All browsing and interaction with Strudel happens in real-time - there is no need to wait while the maps are generated. It is built using Java 1.6 and ships with its own JRE, so there is no need for users to install or update Java.
Visualize multiple genomes and thousands of homologies interactively and in real time
Continuous zoom ranging from entire genome views to singles features
Explore intervals such as QTLs and list annotation for features
Search for features by name
Filter homologies on display by BLAST e-value
Single genome mode also supported
Ships with example dataset to facilitate familiarization with the software
What's New in This Release:New features:
В· Zooming now supported by Ctrl+scroll.
В· Added individual maximum zoom value spinners for genomes so that each genome can have a separate maximum value.
В· Have added a check for unsupported numbers of maps within genomes (at the time of data loading). If this fails the data load is aborted with an error message to that extent.
В· Basic support for the MAF format added. New parser and some modifications to existing data loading code which will allow additional file formats to be added in the future more easily.
В· Have added the option to display full feature information on mouseover. This is controlled as usual through a checkbox in the settings panel and through a menu item. This applies only to mouseover situations -- in all other instances of label display only feature names are used.
В· Multiple entries in the results table can now be selected and highlighted simultaneously.
В· Altered find feature by name functionality so that it now uses a "Show Feature Table" button...
System Requirements:No special requirements.
Program Release Status: New Release
Program Install Support: Install and Uninstall