RetroMap for Windows Publisher's description
RetroMap is an application designed to help characterize LTR retroelements on a genome scale in a visually interactive manner.
RetroMap is an application designed to help characterize LTR retroelements on a genome scale in a visually interactive manner. This is NOT a particularly great for comprehensive identification of elements found in highly nested contexts. Only the most internal element of those which are nested is likely to be identified as a complete element. The other elements will be treated as solo LTRs and internal regions depending on how you have set up your element searches. However, it is still a handy way to get a quick visual overview of the situation and create pretty figures.
Any significant future changes will be reflected in this document. Please note that this software is highly experimental and has not been published yet though it is mentioned briefly in my 2004 Genome Biology paper. Until noted otherwise in this document, any citations should refer to the Genome Biology manuscript. I will work to address any problems you may have and incorporate your suggestions and requests for features as best as I am able.
System Requirements:В· Java
Program Release Status: New Release
Program Install Support: Install and Uninstall