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  • Last update: 5 years ago
  • Total downloads: 94
  • Operating system: Win All
  • Publisher: Youri Hoogstrate
See full specifications

windows default iconncRNA Mapper Publisher's description

ncRNA Mapper is a computer program that gives more insight in the localization of sequencing fragments.

ncRNA Mapper is a computer program that gives more insight in the localization of sequencing fragments. Given that sequencing of RNA gives reads at fixed base-positions, ncRNA Mapper analyzes the alignments (generated by Short Sequence Location Mapper; SSLM) by:

visualizing them
retrieving the conservation of each given nucleotide
predicting the folding (done by centroid_fold)
calculatinging how conserved the fragment is relative to the whole RNA sequence

The input that is required to accomplish these methods is SSLM-data, the RNA file where SSLM is based on, and an internet connection to download the conservation tracks.

System Requirements:

No special requirements.
Program Release Status: New Release
Program Install Support: Install and Uninstall

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