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  • License: Freeware
  • Last update: 5 years ago
  • Total downloads: 80
  • Price: Free |
  • Operating system: Win All
  • Publisher: Hadoop-BAM Team
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windows default iconHadoop-BAM for Windows Publisher's description

Hadoop-BAM is a library for distributed processing of genetic data from next generation sequencer machines.

Hadoop-BAM is a library for distributed processing of genetic data from next generation sequencer machines. It allows scalable manipulation of aligned reads in the Hadoop distributed computing framework. It acts as an integration layer between analysis applications and BAM (Binary Alignment/Map) files that are processed using Hadoop. Hadoop-BAM solves the issues related to BAM data access by presenting a convenient API for implementing map and reduce functions in the Hadoop map-reduce framework.

The library builds on top of the popular Picard SAM-JDK, so tools that rely on the Picard API are expected to be easily convertible to support large scale distributed processing.

What's New in This Release:

В· Fix embedded Picard to not have an accidentally leftover dependency on Picard 1.47.
В· Clarify some .jar dependencies in the README.

System Requirements:

В· Java
Program Release Status: New Release
Program Install Support: Install and Uninstall

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