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  • License: Freeware
  • Last update: 6 years ago
  • Total downloads: 141
  • Price: Free |
  • Operating system: Linux, Mac OS X, Win All, BSD, Solaris
  • Publisher: Kai (4 other programs)
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scripts default iconSpikeTrain (Scripts) Publisher's description

SpikeTrain is a GUI summarizing several functions for the analysis of electrophysiological data.

SpikeTrain is a GUI summarizing several functions for the analysis of electrophysiological data.

It provides multiselection of data, so a whole bunch of data can be analyzed at once.

For spike discrimination the user can select an upper and a lower threshold.
Threshs can be set directly in the figure displaying the original recording.
This can be done for the whole recording or for each sweep.

Analysis contains peristimulus time histogram (PSTH), peristimulus phase histogram (PSPH) and the corresponding rasterplots (thx Rajiv).
Phaselocking and synchronization of events is calculated as well as spike frequencies and spike count.

Statistics can be done for the evoked spike frequency within one recording and visualized as boxplot.
The whole statistic can be exported as spreadsheet.

With a spreadsheet numbering the data, it is possible to arrange data within SpikeTrain. This way one can easily create 2D field plots of the data.

Calculated values can be exported to base workspace, so they are available for further calculations in Matlab.

With the SON library (available from the file exchange) CEDВґs Spike2 data can easily be converted into .mat files, with which SpikeTrain works.

The user can set several parameter, like frequencies, offset, bin width and channel allocation.

System Requirements:

MATLAB 7.4 (R2007a)
Program Release Status: New Release
Program Install Support: Install and Uninstall

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